DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trm7-34 and AT4G25730

DIOPT Version :10

Sequence 1:NP_650947.1 Gene:Trm7-34 / 42508 FlyBaseID:FBgn0038861 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_194303.2 Gene:AT4G25730 / 828678 AraportID:AT4G25730 Length:821 Species:Arabidopsis thaliana


Alignment Length:380 Identity:101/380 - (26%)
Similarity:174/380 - (45%) Gaps:94/380 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRT-SKDKRDIFYRLAKEQGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQVLAKRLY 64
            ||:. .|.:.|.:||||||:|:|:|:::||||.|..:.||......:|||||||.|.||..    
plant     1 MGKVKGKHRLDKYYRLAKERGFRSRASYKLLQLDAKYSLLHSAHAVLDLCAAPGGWMQVAV---- 61

  Fly    65 EPLPPEEREKVK----IIAVDLQGMAPIEGVKQLRADISK---ESTAEAIIEFFGGEKAQIVVSD 122
                    |||.    ::.:||..:.|:.|...:..||::   :|..:.::|..|.....:|:.|
plant    62 --------EKVPVGSLVLGIDLVPILPVRGCVTMTQDITRTECKSKIKQVMEQHGVSAFNLVLHD 118

  Fly   123 GAPDSTGMHDFDSYVQGELLLSALSISTFILEEGGSFVSKIYRA-DRTSRLYTQLKRFFKNVCVF 186
            |:|:..|....::..|..|::.::.::|..|...|:.|:|::|: |..|.||. |.|.|:.|.||
plant   119 GSPNVGGAWAQEAMSQNALVIDSVRLATEFLARNGNLVTKVFRSRDYNSVLYC-LGRLFEKVEVF 182

  Fly   187 KPSASRNSSIEAFVVAREFCLPDGYKPCNLTTEWHDQPESWVGRKKESPPVVQVPFVAYKGELDS 251
            ||.|||::|.|.::|..::..|....|..|     |....:   |:.:.|..:|..|....:...
plant   183 KPPASRSASAETYLVGLKYLAPAKIDPRLL-----DYRHLF---KESAEPTRKVVDVLGGSKQKR 239

  Fly   252 DRT-YDLGE----------NYVYKEPVQQPLTAAYQDILQKTSQV-------------NIKYEGI 292
            :|. |:.||          ::::.|   .||     |:|..|:.:             ::..|.|
plant   240 NRDGYEDGESILRRVASAADFIWSE---NPL-----DVLGTTTSISFDDQASLPLKEHDLTTEEI 296

  Fly   293 RVIHDE---------EMLKKW-----------------------LENDENKSEKL 315
            :::.|:         :.:.||                       .|::||:.:||
plant   297 KILCDDLPVLGKNDFKHILKWRMQIRKALTPEKKEVAKPEPDVGKEDEENEDDKL 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trm7-34NP_650947.1 RlmE 1..205 CDD:440062 73/212 (34%)
AT4G25730NP_194303.2 FtsJ 22..201 CDD:426399 62/191 (32%)
DUF3381 235..383 CDD:463375 20/125 (16%)
Spb1_C 604..786 CDD:462264
Blue background indicates that the domain is not in the aligned region.

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