DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7009 and CG5220

DIOPT Version :9

Sequence 1:NP_650947.1 Gene:CG7009 / 42508 FlyBaseID:FBgn0038861 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_650590.1 Gene:CG5220 / 42056 FlyBaseID:FBgn0038471 Length:302 Species:Drosophila melanogaster


Alignment Length:321 Identity:158/321 - (49%)
Similarity:214/321 - (66%) Gaps:45/321 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRTSKDKRDIFYRLAKEQGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQVLAKRLYE 65
            ||:||||||||:||.||::|||||||||||..||.:.:|.|:.||||||||||||||||:::||:
  Fly     1 MGKTSKDKRDIYYRQAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKLYD 65

  Fly    66 PL-PPEEREKVKIIAVDLQGMAPIEGVKQLRADISKESTAEAIIEFFGG-EKAQIVVSDGAPDST 128
            .. ..:|:..|||||||||.||||.|:.||:.||:|:|||||||..||| ||||:||.|||||.|
  Fly    66 TCETDDEKSAVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQLVVCDGAPDVT 130

  Fly   129 GMHDFDSYVQGELLLSALSISTFILEEGGSFVSKIYRADRTSRLYTQLKRFFKNVCVFKPSASRN 193
            |:|:.|.|:|.:||::||||:|.:||.||:||:||::.:.||.|.:|::.|||...::||.:||.
  Fly   131 GVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQMQIFFKKFDIYKPPSSRP 195

  Fly   194 SSIEAFVVAREFCLPDGYKPCNLTTEWHD------QPESWVGRKKESPPVVQVPFVAYKGELD-- 250
            ||||||||..:||||:||.|..:.....|      :..|.|.|:       .|||:|. |:|:  
  Fly   196 SSIEAFVVCSDFCLPEGYIPQVINPARDDIRLLAQKTGSEVNRR-------LVPFIAC-GDLNGL 252

  Fly   251 SD----RTYDLGEN-----YVY---KEPVQQPLTAAYQDILQKTSQVNIKYEGIRVIHDEE 299
            ||    :|....|:     |||   .:....||  .:::||::             ::||:
  Fly   253 SDPEEGKTSSSDESKSNLEYVYDAVMDDASYPL--EFKEILKQ-------------VYDEQ 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7009NP_650947.1 RlmE 4..205 CDD:223370 126/202 (62%)
CG5220NP_650590.1 RlmE 3..211 CDD:223370 129/207 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454797
Domainoid 1 1.000 216 1.000 Domainoid score I2694
eggNOG 1 0.900 - - E1_COG0293
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 233 1.000 Inparanoid score I717
Isobase 1 0.950 - 0 Normalized mean entropy S638
OMA 1 1.010 - - QHG54241
OrthoDB 1 1.010 - - D1362679at2759
OrthoFinder 1 1.000 - - FOG0004400
OrthoInspector 1 1.000 - - otm14685
orthoMCL 1 0.900 - - OOG6_102125
Panther 1 1.100 - - P PTHR10920
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3115
1312.760

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