DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trm7-34 and Ftsj1

DIOPT Version :10

Sequence 1:NP_650947.1 Gene:Trm7-34 / 42508 FlyBaseID:FBgn0038861 Length:320 Species:Drosophila melanogaster
Sequence 2:XP_006256811.1 Gene:Ftsj1 / 363450 RGDID:1561061 Length:326 Species:Rattus norvegicus


Alignment Length:294 Identity:150/294 - (51%)
Similarity:198/294 - (67%) Gaps:17/294 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRTSKDKRDIFYRLAKEQGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQVLAKRLYE 65
            ||||||||||::||||||:||||||||||||.||.|||.:|:.||||||||||||||||::::  
  Rat     1 MGRTSKDKRDVYYRLAKEKGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVLSQKV-- 63

  Fly    66 PLPPEEREKVKIIAVDLQGMAPIEGVKQLRADISKESTAEAIIEFFGGEKAQIVVSDGAPDSTGM 130
                ..:...:::|||||.|||:.||.|::.||::.|||:.||:.|.|..|.:||.|||||.||:
  Rat    64 ----GGQSSGQVVAVDLQAMAPLPGVIQIQGDITQLSTAKEIIQHFEGCPADLVVCDGAPDVTGL 124

  Fly   131 HDFDSYVQGELLLSALSISTFILEEGGSFVSKIYRADRTSRLYTQLKRFFKNVCVFKPSASRNSS 195
            ||.|.|:|.:|||:||:|:|.:|:.||.||:||:|....:.||:||:.||.:|...||.:|||||
  Rat   125 HDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRIFFSSVLCAKPKSSRNSS 189

  Fly   196 IEAFVVAREFCLPDGYKPCNLTTEWHDQPESWVGRKKESPPVVQVPFVAYKGEL---DSDRTYDL 257
            ||||.|.:.:..|:|:.| :||....:........:...|..|.||||.. |:|   ||||||.|
  Rat   190 IEAFAVCQGYDPPEGFIP-DLTRPLMNHSYETDFNQLHGPARVIVPFVTC-GDLSAYDSDRTYSL 252

  Fly   258 ----GENYVYKEPVQQPLTAAYQDI--LQKTSQV 285
                |..|.|..|.|.|:...||:.  |:|..|:
  Rat   253 DLDNGSEYKYTPPTQPPIAPPYQEACRLKKNGQL 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trm7-34NP_650947.1 RlmE 1..205 CDD:440062 119/203 (59%)
Ftsj1XP_006256811.1 RlmE 1..199 CDD:440062 119/203 (59%)

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