DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trm7-34 and spb1

DIOPT Version :10

Sequence 1:NP_650947.1 Gene:Trm7-34 / 42508 FlyBaseID:FBgn0038861 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_593129.1 Gene:spb1 / 2542112 PomBaseID:SPAC1687.11 Length:802 Species:Schizosaccharomyces pombe


Alignment Length:330 Identity:100/330 - (30%)
Similarity:157/330 - (47%) Gaps:48/330 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RTSKDKRDIFYRLAKEQGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQVLAKRLYEPL 67
            :|:|.:.|.:|:||||||:|:|:||||:|.::.:..||.....:|||||||.|.||.:|..    
pombe     7 KTAKGRLDKWYKLAKEQGYRSRAAFKLVQLNQKYSFLEKAKVIIDLCAAPGGWLQVASKTC---- 67

  Fly    68 PPEEREKVKIIAVDLQGMAPIEGVKQLRADISKESTAEAIIEFFGGEKAQIVVSDGAPDSTGMHD 132
                :....|:.|||..:.||........||:.:.....:..:....||.:|:.||||:......
pombe    68 ----KPGSLIVGVDLAPIKPIPNCHTFVEDITSDKCRSQLRGYLKTWKADVVLHDGAPNVGSAWL 128

  Fly   133 FDSYVQGELLLSALSISTFILEEGGSFVSKIYRADRTSRLYTQLKRFFKNVCVFKPSASRNSSIE 197
            .|:|.|.:|:|.::.::...|..||:||:|::|:...:.|....|:.|..|...||.:|||.|.|
pombe   129 QDAYGQAQLVLMSMKLACEFLVAGGTFVTKVFRSRDYNNLLWVFKQLFNKVEATKPPSSRNVSAE 193

  Fly   198 AFVVAREFCLPDGYK-PCNLTTEWHDQPESWVGRKKESPPVVQVPFVAY---------KGELDSD 252
            .|||.|      ||| |..|...:.| |.:.....:|  ||..|....:         :|..|.|
pombe   194 IFVVCR------GYKAPKKLDPRFTD-PRTVFEEVQE--PVTNVDAKVFHPEKRKRSREGYADDD 249

  Fly   253 RTYD---LGENYV-YKEPVQQPLTAAYQDILQKTSQVNIKYEGIRVIHDEEMLKKWLENDENKSE 313
            .|..   |...:| ..:|:|         ||..::::....:      |||..:  |.|.:..:|
pombe   250 YTLHKTVLASEFVTANDPIQ---------ILGTSAEIVFPKD------DEECQR--LYNLDVTTE 297

  Fly   314 KLGAC 318
            ::..|
pombe   298 EILLC 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trm7-34NP_650947.1 RlmE 1..205 CDD:440062 72/201 (36%)
spb1NP_593129.1 RlmE 1..203 CDD:440062 74/209 (35%)
DUF3381 235..386 CDD:463375 17/85 (20%)
Spb1_C 593..798 CDD:462264
Blue background indicates that the domain is not in the aligned region.

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