DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trm7-34 and H06I04.3

DIOPT Version :10

Sequence 1:NP_650947.1 Gene:Trm7-34 / 42508 FlyBaseID:FBgn0038861 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_497655.1 Gene:H06I04.3 / 175414 WormBaseID:WBGene00019168 Length:833 Species:Caenorhabditis elegans


Alignment Length:376 Identity:110/376 - (29%)
Similarity:175/376 - (46%) Gaps:98/376 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RTSKDKRDIFYRLAKEQGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQVLAKRLYEPL 67
            :..|.:||.:|:||||.|:|:|:||||:|.::.|:.||.....||||||||.|.||.::  :.|:
 Worm     6 KIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVASQ--FMPV 68

  Fly    68 PPEEREKVKIIAVDLQGMAPIEGVKQLRADISKESTAEAIIEFFGGEKAQIVVSDGAPDSTGMH- 131
                  ...|:.|||..:.||:....|:.||:...|..||.:......|..|:.|||| :.|:: 
 Worm    69 ------SSLIVGVDLAPIKPIKNCIALQGDITTNETRAAIKKELKTWSADCVLHDGAP-NVGLNW 126

  Fly   132 DFDSYVQGELLLSALSISTFILEEGGSFVSKIYRADRTSRLYTQLKRFFKNVCVFKPSASRNSSI 196
            ..|::.|..|.||||.::|.||.:||:||:|::|::..|.|....::.||.|.|:||:|||..|.
 Worm   127 VHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSCLIRVFEKLFKRVHVWKPAASRLESA 191

  Fly   197 EAFVVAREFCLPD--------------------GYKPCNLTTEWHDQPES-WVGRKKESPPVVQV 240
            |.|||...:..||                    |.||         .|:: .:|::|::      
 Worm   192 EIFVVCEVYQKPDKVGAEYLDPKKVFANPDGSEGTKP---------NPQNLLIGKQKKA------ 241

  Fly   241 PFVAYKGELDSDRTYDLGENYVYK--EPVQQPLTAAYQDIL----------------QKTSQVNI 287
                 |.|     .||.....::.  .......::.|.|||                :||::..|
 Worm   242 -----KAE-----GYDTDSLAIHSTINATDFIKSSGYLDILGTANVITLDDEKWKNHEKTTEEVI 296

  Fly   288 KY-EGIRVIHDEEM--LKKW---------------------LENDENKSEK 314
            :| ..::|:...|:  |.:|                     :|.:||.:|:
 Worm   297 EYMNDVKVLGPRELRVLLRWRKSMLETLEEQRKAVEGEAKEVEIEENLTEE 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trm7-34NP_650947.1 RlmE 1..205 CDD:440062 82/202 (41%)
H06I04.3NP_497655.1 RlmE 9..197 CDD:440062 81/196 (41%)
DUF3381 237..363 CDD:463375 21/127 (17%)
PTZ00121 <283..814 CDD:173412 12/65 (18%)
Spb1_C 618..800 CDD:462264
Blue background indicates that the domain is not in the aligned region.

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