DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trm7-34 and ftsj3

DIOPT Version :10

Sequence 1:NP_650947.1 Gene:Trm7-34 / 42508 FlyBaseID:FBgn0038861 Length:320 Species:Drosophila melanogaster
Sequence 2:XP_012822455.1 Gene:ftsj3 / 100145257 XenbaseID:XB-GENE-5797493 Length:850 Species:Xenopus tropicalis


Alignment Length:320 Identity:102/320 - (31%)
Similarity:149/320 - (46%) Gaps:69/320 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RTSKDKRDIFYRLAKEQGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQVLAKRLYEPL 67
            :..|.::|.||.||||.|:|:||||||:|.:..||.|......||||||||.|.||.||  :.|:
 Frog     6 KVGKSRKDKFYHLAKETGYRSRSAFKLIQLNRKFQFLPKARALVDLCAAPGGWLQVAAK--FMPI 68

  Fly    68 PPEEREKVKIIAVDLQGMAPIEGVKQLRADISKESTAEAIIEFFGGEKAQIVVSDGAPDSTGMHD 132
                  ...||.|||..:.||..|..|:.||:.|:..:.:.:.....||.:|::||||:......
 Frog    69 ------SSLIIGVDLVPIKPIPKVLTLQEDITTEACRQTVRKHLQTWKADVVLNDGAPNVGANWT 127

  Fly   133 FDSYVQGELLLSALSISTFILEEGGSFVSKIYRADRTSRLYTQLKRFFKNVCVFKPSASRNSSIE 197
            .|::.|..|.|.||.::...|..||.|::||:|:.....|...|::|||.|...||.|||:.|.|
 Frog   128 HDAFSQVHLSLMALRLACDCLSRGGWFITKIFRSSDYQSLLWILQQFFKKVNSTKPQASRSESAE 192

  Fly   198 AFVVAREFCLPDGYKPCNLTTEWHDQPESWVGRKKESPPVVQVPFVAYKGELDSDRTYDLGENYV 262
            .|||.:.|..||     .:.|.:.|                  |..|:| ::|.. ...:.:...
 Frog   193 IFVVCQGFLAPD-----KIDTRFFD------------------PKFAFK-DVDGP-VQTVSQLLS 232

  Fly   263 YKEP-----------------------VQQPLTAAYQDILQKTSQVNIKYEGIRVIHDEE 299
            :|:|                       |:.|:     |.|.|||::        ::.|.|
 Frog   233 HKKPKAEGYAATSLSLYHRASLVDFLTVENPV-----DFLSKTSEI--------ILDDTE 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trm7-34NP_650947.1 RlmE 1..205 CDD:440062 82/201 (41%)
ftsj3XP_012822455.1 RlmE 1..200 CDD:440062 82/201 (41%)
DUF3381 234..371 CDD:463375 11/59 (19%)
Spb1_C 659..850 CDD:462264
Blue background indicates that the domain is not in the aligned region.

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