DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5793 and fahd2a

DIOPT Version :10

Sequence 1:NP_650944.3 Gene:CG5793 / 42505 FlyBaseID:FBgn0038858 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_001184157.1 Gene:fahd2a / 734144 XenbaseID:XB-GENE-964031 Length:319 Species:Xenopus tropicalis


Alignment Length:213 Identity:86/213 - (40%)
Similarity:125/213 - (58%) Gaps:16/213 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LSNGKKIVGVALNYMDVVLARNVPVPKEPLVFLKPTSSYLQEGQPIVLPKVFTKVAYEVELGVVI 76
            :||.:||:.:.:||:|..|.:||||||||::|.|..||.:....||.:|....:|.:||||..||
 Frog   107 ISNPEKIICIGMNYVDHCLEQNVPVPKEPIIFSKFASSIVGPSDPIRIPAESKEVDWEVELAFVI 171

  Fly    77 GKPCKNVSKADAMSYVAGYCLALDLTA---QCNLGPARAAGHPWTLGKGFDTSTPVS-QFIPIEK 137
            ||..:|:.:.|||.:|.|:.:|.|::|   |.|..     |..|.|||.|||..|:. ..:..:.
 Frog   172 GKKGRNIKEEDAMDHVVGFTVAHDVSARDWQMNKN-----GKQWLLGKTFDTFCPLGPALVTKDA 231

  Fly   138 VTDPHNLPLWLTVNGDLKQNGCTADLIFKVPDIISYVSKYMTLEANDLILTGTPNGADAF----- 197
            ::|||||.:...||.||.||..|..::||...:|::.||::||...|:.|||||.|...|     
 Frog   232 ISDPHNLGIRCRVNEDLVQNSNTNQMVFKTEALIAWASKFVTLNPGDIFLTGTPPGVGVFRKPPV 296

  Fly   198 --KAGDVIQCGMADLAKL 213
              |||||:.|.:.:|..:
 Frog   297 FLKAGDVVLCEIDELGAI 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5793NP_650944.3 YcgM 17..217 CDD:439949 84/208 (40%)
fahd2aNP_001184157.1 YcgM 105..319 CDD:439949 86/213 (40%)

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