| Sequence 1: | NP_001262802.1 | Gene: | slmb / 42504 | FlyBaseID: | FBgn0283468 | Length: | 597 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_012962.3 | Gene: | CAF4 / 853908 | SGDID: | S000001744 | Length: | 643 | Species: | Saccharomyces cerevisiae |
| Alignment Length: | 539 | Identity: | 110/539 - (20%) |
|---|---|---|---|
| Similarity: | 212/539 - (39%) | Gaps: | 129/539 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 12 ETNSNAQAFTTTMLYDPVRKKDSSPTYQTERELCFQYFTQWSESGQVDFVEHLLSRMCHYQHGQI 76
Fly 77 NAYLKPMLQRDFITLLPIKGLDHIAENILSYLDAESLKSSELVCKEWLRVISEGMLWKKLIERKV 141
Fly 142 RTDSLWRGLAERRNWMQYLFKPRPGQT----------QRPHSFHRELFPKIMNDIDSIENNWRTG 196
Fly 197 RHMLRRINCRSENSKGVYCLQYDD--GKIV-SGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQY 258
Fly 259 DDK---VIISGSSDSTVRVWDVN---------------TGEMVNTLIH----HCEAVLHLRFNNG 301
Fly 302 MMVTCSKDRSIAVWDMT------------SPSEITLR---------RVLVGHRA-AVNVVDFDEK 344
Fly 345 YIVSASGDRTIKVWSTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVL 409
Fly 410 EGHEELVRCIRFDTKRIVSGAYDGKIKVWDL------VAALDPRAASNTLCLNTLVEHTGRVFRL 468
Fly 469 QFDEFQIVSSSHDDTILIW 487 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| slmb | NP_001262802.1 | Beta-TrCP_D | 47..85 | CDD:288940 | 4/37 (11%) |
| F-box-like | 89..136 | CDD:289689 | 6/46 (13%) | ||
| WD40 | <192..495 | CDD:225201 | 82/349 (23%) | ||
| WD40 | 210..488 | CDD:238121 | 80/331 (24%) | ||
| WD40 repeat | 213..248 | CDD:293791 | 10/37 (27%) | ||
| WD40 repeat | 254..288 | CDD:293791 | 15/51 (29%) | ||
| WD40 repeat | 293..330 | CDD:293791 | 10/57 (18%) | ||
| WD40 repeat | 337..370 | CDD:293791 | 4/32 (13%) | ||
| WD40 repeat | 376..410 | CDD:293791 | 13/33 (39%) | ||
| WD40 repeat | 416..459 | CDD:293791 | 10/48 (21%) | ||
| WD40 repeat | 465..487 | CDD:293791 | 2/21 (10%) | ||
| CAF4 | NP_012962.3 | Caf4 | 65..124 | CDD:402971 | |
| WD40 | 318..641 | CDD:238121 | 79/330 (24%) | ||
| WD40 repeat | 322..360 | CDD:293791 | 10/37 (27%) | ||
| WD40 repeat | 366..422 | CDD:293791 | 17/55 (31%) | ||
| WD40 repeat | 427..461 | CDD:293791 | 9/33 (27%) | ||
| WD40 repeat | 472..526 | CDD:293791 | 7/53 (13%) | ||
| WD40 repeat | 532..563 | CDD:293791 | 11/30 (37%) | ||
| WD40 repeat | 571..611 | CDD:293791 | 10/39 (26%) | ||
| WD40 repeat | 617..641 | CDD:293791 | 3/23 (13%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C157345838 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.840 | |||||