| Sequence 1: | NP_001262802.1 | Gene: | slmb / 42504 | FlyBaseID: | FBgn0283468 | Length: | 597 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_116585.1 | Gene: | CDC4 / 850539 | SGDID: | S000001885 | Length: | 779 | Species: | Saccharomyces cerevisiae |
| Alignment Length: | 541 | Identity: | 141/541 - (26%) |
|---|---|---|---|
| Similarity: | 222/541 - (41%) | Gaps: | 138/541 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 5 ETDKIMDETNSNAQAFTTTMLYDPVRKKDS--SPTYQTE-------RELCFQYFTQWSESGQVDF 60
Fly 61 VEHLLSRMCHYQHGQINAYLKPMLQRDFITLLPIKGLDHIAENILSYLDAESLKSSELVCKEWLR 125
Fly 126 VISEG-MLWKKLI--ERKVRT---DSLWRGLAERRNWMQYLFKPRPGQTQRPH-SFHRELFPKIM 183
Fly 184 NDIDSIENNWRTGRHMLRRINCRSENSKGVYCLQYDDGKIVSGLRDNTIKIWDRTDLQCVKTLMG 248
Fly 249 HTGSVLCLQY-DDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNGMMVTCSKDRSI 312
Fly 313 AVWDMTSPSEITLRRVLVGHRAAVNVVDFDE----KYIVSASGDRTIKVW---STSSCE------ 364
Fly 365 --------------FVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEEL 415
Fly 416 VRCIRFD--TKRIVSGAYDGKIKVWDL----------VAALDPRAASNTL-CLNTLVEHTGRVFR 467
Fly 468 LQFDEFQIVSSSHDDTILIWD 488 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| slmb | NP_001262802.1 | Beta-TrCP_D | 47..85 | CDD:288940 | 5/37 (14%) |
| F-box-like | 89..136 | CDD:289689 | 16/47 (34%) | ||
| WD40 | <192..495 | CDD:225201 | 91/338 (27%) | ||
| WD40 | 210..488 | CDD:238121 | 85/318 (27%) | ||
| WD40 repeat | 213..248 | CDD:293791 | 9/34 (26%) | ||
| WD40 repeat | 254..288 | CDD:293791 | 13/34 (38%) | ||
| WD40 repeat | 293..330 | CDD:293791 | 2/36 (6%) | ||
| WD40 repeat | 337..370 | CDD:293791 | 15/59 (25%) | ||
| WD40 repeat | 376..410 | CDD:293791 | 11/33 (33%) | ||
| WD40 repeat | 416..459 | CDD:293791 | 12/55 (22%) | ||
| WD40 repeat | 465..487 | CDD:293791 | 6/21 (29%) | ||
| CDC4 | NP_116585.1 | CDC4_D | 228..272 | CDD:407099 | 7/51 (14%) |
| F-box-like | 275..319 | CDD:403981 | 16/47 (34%) | ||
| WD40 | 374..693 | CDD:238121 | 89/328 (27%) | ||
| WD40 repeat | 385..420 | CDD:293791 | 9/34 (26%) | ||
| WD40 repeat | 426..461 | CDD:293791 | 16/77 (21%) | ||
| WD40 repeat | 466..527 | CDD:293791 | 16/60 (27%) | ||
| WD40 repeat | 534..567 | CDD:293791 | 11/32 (34%) | ||
| WD40 repeat | 573..629 | CDD:293791 | 12/55 (22%) | ||
| WD40 repeat | 637..667 | CDD:293791 | 7/22 (32%) | ||
| WD40 repeat | 716..751 | CDD:293791 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R947 |
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.940 | |||||