| Sequence 1: | NP_001262802.1 | Gene: | slmb / 42504 | FlyBaseID: | FBgn0283468 | Length: | 597 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001300561.1 | Gene: | lin-23 / 174058 | WormBaseID: | WBGene00003009 | Length: | 667 | Species: | Caenorhabditis elegans |
| Alignment Length: | 625 | Identity: | 347/625 - (55%) |
|---|---|---|---|
| Similarity: | 419/625 - (67%) | Gaps: | 67/625 - (10%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 14 NSNAQAFTTTMLYD-------PVRKKDSSPTYQTERELCFQYFTQWSESGQVDFVEHLLSRMCHY 71
Fly 72 QHGQINAYLKPMLQRDFITLLPIKGLDHIAENILSYLDAESLKSSELVCKEWLRVISEGMLWKKL 136
Fly 137 IERKVRTDSLWRGLAERRNWMQYLFKPRPGQTQR---------------------PHSFHRELFP 180
Fly 181 KIMNDIDSIENNWRTGRHMLRRINCRSENSKGVYCLQYDDGKIVSGLRDNTIKIWDRTDLQCVKT 245
Fly 246 LMGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNGMMVTCSKDR 310
Fly 311 SIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWSTSSCEFVRTLNGHKRG 375
Fly 376 IACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRFDTKRIVSGAYDGKIKVWDL 440
Fly 441 VAALDPRAASNTLCLNTLVEHTGRVFRLQFDEFQIVSSSHDDTILIWDFLNFTPN--ENKTGRTP 503
Fly 504 SPALMEHXHFVQRQL-------RELHLQSSSEGEEDDDADEDDEDDFEEEDSRNDAGAFMGGYVR 561
Fly 562 HR-----DAGGSGSVTGSGSDPES---DDLDFDIDVENIN 593 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| slmb | NP_001262802.1 | Beta-TrCP_D | 47..85 | CDD:288940 | 13/37 (35%) |
| F-box-like | 89..136 | CDD:289689 | 17/46 (37%) | ||
| WD40 | <192..495 | CDD:225201 | 247/302 (82%) | ||
| WD40 | 210..488 | CDD:238121 | 233/277 (84%) | ||
| WD40 repeat | 213..248 | CDD:293791 | 27/34 (79%) | ||
| WD40 repeat | 254..288 | CDD:293791 | 26/33 (79%) | ||
| WD40 repeat | 293..330 | CDD:293791 | 30/36 (83%) | ||
| WD40 repeat | 337..370 | CDD:293791 | 26/32 (81%) | ||
| WD40 repeat | 376..410 | CDD:293791 | 28/33 (85%) | ||
| WD40 repeat | 416..459 | CDD:293791 | 34/42 (81%) | ||
| WD40 repeat | 465..487 | CDD:293791 | 20/21 (95%) | ||
| lin-23 | NP_001300561.1 | Beta-TrCP_D | 41..80 | CDD:198096 | 13/38 (34%) |
| WD40 | 168..515 | CDD:225201 | 259/346 (75%) | ||
| WD40 | 222..500 | CDD:238121 | 233/277 (84%) | ||
| WD40 repeat | 225..260 | CDD:293791 | 27/34 (79%) | ||
| WD40 repeat | 266..300 | CDD:293791 | 26/33 (79%) | ||
| WD40 repeat | 305..342 | CDD:293791 | 30/36 (83%) | ||
| WD40 repeat | 349..382 | CDD:293791 | 26/32 (81%) | ||
| WD40 repeat | 388..422 | CDD:293791 | 28/33 (85%) | ||
| WD40 repeat | 428..471 | CDD:293791 | 34/42 (81%) | ||
| WD40 repeat | 477..499 | CDD:293791 | 20/21 (95%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 73 | 1.000 | Domainoid score | I6055 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0281 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 638 | 1.000 | Inparanoid score | I449 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG48038 | |
| OrthoDB | 1 | 1.010 | - | - | D150270at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002886 | |
| OrthoInspector | 1 | 1.000 | - | - | oto20392 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_102978 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR44156 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R947 |
| SonicParanoid | 1 | 1.000 | - | - | X2712 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 14 | 13.870 | |||||