Sequence 1: | NP_001262802.1 | Gene: | slmb / 42504 | FlyBaseID: | FBgn0283468 | Length: | 597 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004911205.1 | Gene: | fbxw7 / 100145670 | XenbaseID: | XB-GENE-1000486 | Length: | 703 | Species: | Xenopus tropicalis |
Alignment Length: | 576 | Identity: | 166/576 - (28%) |
---|---|---|---|
Similarity: | 266/576 - (46%) | Gaps: | 105/576 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 30 RKKDSSPTYQTERELCFQYFTQWSESGQVDFVEHLLSRMCHYQHGQINAYLKPMLQRDFITLLPI 94
Fly 95 KGLDHIAENILSYLDAESLKSSELVCKEWLRVISEGMLWKKLIERKVRTDSLWRGLAERRNWMQY 159
Fly 160 LFKPRPGQTQRPHSF-----HRELFPKIMNDIDSIENNWRTGRHMLRRINCRSENSKGVYCLQYD 219
Fly 220 DGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMVN 284
Fly 285 TLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSA 349
Fly 350 SGDRTIKVW--STSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGH 412
Fly 413 EELVRCIRFDTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLV---EHTGRVFRLQFDEFQ 474
Fly 475 IVSSSHDDTILIWDFLNFTPNENKTGRTPSPALMEHXHFVQRQLRELHLQSSSEGEEDDDADEDD 539
Fly 540 EDDFEEEDSRNDAGAFMGGYVRHRDAGGSGSVTGSGSDPESDD-----LDFDIDVE 590 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
slmb | NP_001262802.1 | Beta-TrCP_D | 47..85 | CDD:288940 | 6/37 (16%) |
F-box-like | 89..136 | CDD:289689 | 14/46 (30%) | ||
WD40 | <192..495 | CDD:225201 | 111/307 (36%) | ||
WD40 | 210..488 | CDD:238121 | 105/282 (37%) | ||
WD40 repeat | 213..248 | CDD:293791 | 15/34 (44%) | ||
WD40 repeat | 254..288 | CDD:293791 | 16/33 (48%) | ||
WD40 repeat | 293..330 | CDD:293791 | 8/36 (22%) | ||
WD40 repeat | 337..370 | CDD:293791 | 11/34 (32%) | ||
WD40 repeat | 376..410 | CDD:293791 | 16/33 (48%) | ||
WD40 repeat | 416..459 | CDD:293791 | 10/42 (24%) | ||
WD40 repeat | 465..487 | CDD:293791 | 8/21 (38%) | ||
fbxw7 | XP_004911205.1 | F-box-like | 277..321 | CDD:372399 | 14/51 (27%) |
WD40 | 370..646 | CDD:238121 | 105/290 (36%) | ||
WD40 repeat | 380..415 | CDD:293791 | 15/34 (44%) | ||
WD40 repeat | 421..455 | CDD:293791 | 16/33 (48%) | ||
WD40 repeat | 460..494 | CDD:293791 | 8/36 (22%) | ||
WD40 repeat | 501..534 | CDD:293791 | 11/34 (32%) | ||
WD40 repeat | 540..574 | CDD:293791 | 16/33 (48%) | ||
WD40 repeat | 582..614 | CDD:293791 | 10/40 (25%) | ||
WD40 repeat | 623..645 | CDD:293791 | 8/21 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R947 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |