DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppan and SPAC1B9.03c

DIOPT Version :9

Sequence 1:NP_476979.1 Gene:ppan / 42502 FlyBaseID:FBgn0010770 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_593755.2 Gene:SPAC1B9.03c / 2542610 PomBaseID:SPAC1B9.03c Length:389 Species:Schizosaccharomyces pombe


Alignment Length:388 Identity:137/388 - (35%)
Similarity:218/388 - (56%) Gaps:38/388 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MG--GKKKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLA--CPYITDLTLDFRRIMEPFTASNL 61
            ||  |||:|..:|...|    :|.:....|.|.||..|.:  ...::.||.|.|.:|||.||..|
pombe     1 MGGIGKKRVKKRTHLKA----DPIQEAAIPKSMVIRSGASEVGRSLSLLTRDLRHMMEPHTAIRL 61

  Fly    62 REKRMNRIKDFVSLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLSKK 126
            :|::.|:|||:::::....|:|:.:.::.....:.:::|.||||||.|::|::.|.:||..|.|.
pombe    62 KERKANKIKDYLTMAGPLGVTHLLVLSRTDNNANLRIIRAPRGPSLHFRIHEYMLNKDVRRLQKN 126

  Fly   127 QMIDNDHFKHAPLVIMNNF----SGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCVLFSYNPD 187
            .......|...||::||:|    |.|..|..|:.||||||||.|::...||.:::|.:|.: ..|
pombe   127 PKSPTTEFLTPPLLVMNHFNQNSSKDSPHEALLTTTFQNMFPPISVQHTNINSVKRVLLLN-RRD 190

  Fly   188 TKLVEMRHYSVQVVPVGLKRAVQKIVKG-----TVPNLGKCNEVVDFVTK----DGYASESEAED 243
            ...:::||:.:...|||:.|.::.::||     .:|:|....::.|:|..    .|.||:||.|:
pombe   191 DGYIDLRHFIISTKPVGISRPIRHLLKGEKKDSDIPDLHNVRDISDYVLHGDGISGAASDSEIEE 255

  Fly   244 DEQSHVVLAQTLKSKGN-------LEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVK 301
            |....:......|::.|       |:.|:.:|||.|||||:|::||||.|..:.|:||||.||.|
pombe   256 DATVEIDRPVPTKTEENLLSASQLLKPKQQAIKLIEIGPRMTLELIKITEDAMGGKVLYHSHVHK 320

  Fly   302 TEDEKETLRKLVEKKRKQKEQRKKEQAEN---RARNLKLKKDEKWAAKRAAEGRTDSDPEDDA 361
            :::|.:......|:.|..||:|||||.||   :..|.|.:||:|      .||.|.|:..||:
pombe   321 SKEEIKQQDNFHEQSRALKEKRKKEQDENVRRKRENKKRRKDQK------KEGITSSNKNDDS 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppanNP_476979.1 Brix 31..212 CDD:214879 64/186 (34%)
Brix <215..295 CDD:294606 32/95 (34%)
SPAC1B9.03cNP_593755.2 Brix 42..204 CDD:282306 57/162 (35%)
Brix <283..350 CDD:294606 34/66 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 166 1.000 Domainoid score I935
eggNOG 1 0.900 - - E1_KOG2963
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5690
Inparanoid 1 1.050 222 1.000 Inparanoid score I897
OMA 1 1.010 - - QHG53510
OrthoFinder 1 1.000 - - FOG0004323
OrthoInspector 1 1.000 - - oto100839
orthoMCL 1 0.900 - - OOG6_101976
Panther 1 1.100 - - LDO PTHR12661
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1766
SonicParanoid 1 1.000 - - X3054
TreeFam 1 0.960 - -
1413.860

Return to query results.
Submit another query.