DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppan and lpd-6

DIOPT Version :9

Sequence 1:NP_476979.1 Gene:ppan / 42502 FlyBaseID:FBgn0010770 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_491108.2 Gene:lpd-6 / 171886 WormBaseID:WBGene00003062 Length:573 Species:Caenorhabditis elegans


Alignment Length:414 Identity:148/414 - (35%)
Similarity:241/414 - (58%) Gaps:16/414 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KKKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLREKRMNR 68
            ::|...|.:...|..::..|:...||..|||||....|:..|..|.|.::||.||.||:..:.|.
 Worm    32 QEKFVKKLQKQKFLENKEIELARQPHCLVIHRGDVGKYVKGLESDLRNLVEPNTAKNLKILKRNN 96

  Fly    69 IKDFVSLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDH 133
            ||||:...:...|::|.:...:...|..:::|..:||:|:|||.|::|||.|::..|:.:..:..
 Worm    97 IKDFIVNGAVLGVTNMMVLTSSDASLQLRMMRFSQGPTLSFKVKQYSLARHVVNCQKRPVATDKL 161

  Fly   134 FKHAPLVIMNNFSGDG--KHLKLMATTFQNMFPSINLATVNIGTIRRCVLFSYNPDTKLVEMRHY 196
            ||.:|||:||.| |||  |||.|:.|..||||||||:.|:.:|.::||::.||:.:|..::|||:
 Worm   162 FKSSPLVVMNGF-GDGTQKHLSLVQTFIQNMFPSINVDTIQLGNLKRCLIVSYDEETDEIQMRHF 225

  Fly   197 SVQVVPVGLKRAVQKIVKG------TVPNLGKCNEVVDFVTKDGYASESEAEDDEQSHVVLAQTL 255
            :::||..||.::|:|:::.      .:|||....::.|:....|..|:||.|.|:| .|.|.|.:
 Worm   226 AIRVVASGLNKSVKKLMQAEKTMGKNIPNLSTYKDISDYFLNPGQLSDSEFEGDQQ-EVELPQDI 289

  Fly   256 -KSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKTEDEKETLRKLVEKKRKQ 319
             :.:|....:||:::|||||||||::|:|||||:..||||||.|..||.||...||..::||::.
 Worm   290 SEGRGCGVGQKSNVRLHEIGPRLTLELVKIEEGIDEGEVLYHKHNAKTPDELIKLRAHMDKKKQM 354

  Fly   320 KEQRKKEQAENRARNLKLKKDEKWA----AKRAAEGRTDSDPEDDAEYYKEEVGEEPDEELFKME 380
            |::|::|..:...|.|.:.|:::.|    .|...|...........:..:.|..:|.|.|: .|.
 Worm   355 KKRREQESEQRVIRRLTIVKEQQDAEEAEVKAIRENAARKQAAATGQVEEVENQKEKDREI-AMN 418

  Fly   381 AKSSRKRPSLGGGMKYKNKRAKLD 404
            .:...||.:...|....:||.:.:
 Worm   419 RERDLKRANEEWGTSEASKRPRYE 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppanNP_476979.1 Brix 31..212 CDD:214879 75/182 (41%)
Brix <215..295 CDD:294606 35/86 (41%)
lpd-6NP_491108.2 Brix 59..229 CDD:214879 70/170 (41%)
Brix <302..375 CDD:382294 35/72 (49%)
PTZ00121 <315..>443 CDD:173412 40/129 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156449
Domainoid 1 1.000 193 1.000 Domainoid score I1877
eggNOG 1 0.900 - - E1_KOG2963
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 261 1.000 Inparanoid score I1911
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004323
OrthoInspector 1 1.000 - - oto19006
orthoMCL 1 0.900 - - OOG6_101976
Panther 1 1.100 - - LDO PTHR12661
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1766
SonicParanoid 1 1.000 - - X3054
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.820

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