DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppan and ppan

DIOPT Version :9

Sequence 1:NP_476979.1 Gene:ppan / 42502 FlyBaseID:FBgn0010770 Length:460 Species:Drosophila melanogaster
Sequence 2:XP_031753615.1 Gene:ppan / 100533517 XenbaseID:XB-GENE-6465745 Length:556 Species:Xenopus tropicalis


Alignment Length:512 Identity:188/512 - (36%)
Similarity:283/512 - (55%) Gaps:77/512 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGKKKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLREKR 65
            ||..|..:.|....|...:...|....|||||..||.....:..|.:|.||.||||||.:|:.::
 Frog     1 MGKDKTKNQKKLKVAANHNAEEEFNAVPHSFVFQRGQIGKNVQQLIVDVRRAMEPFTARSLKVRK 65

  Fly    66 MNRIKDFVSLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMID 130
            .|.:||||:::....|:|..||.|.:|.::||.||||:||:|:|||:|::|.:||:|..||..:.
 Frog    66 KNTLKDFVAVAGPLGVTHFMIFTKTTTNVNFKFVRLPKGPTLSFKVNQYSLMKDVVSSLKKHRMH 130

  Fly   131 NDHFKHAPLVIMNNFSGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCVLFSYNPDTKLVEMRH 195
            .:.|.|.||:::|||...|.|:|||||.|||||||||:..||:.|||||:|.:|:.:|:.::.||
 Frog   131 EEQFTHPPLLVLNNFGNQGMHVKLMATMFQNMFPSINVHKVNLNTIRRCILINYDDETQQLDFRH 195

  Fly   196 YSVQVVPVGLKRAVQKIVKGTVPNLGKCNEVVDFVTKDGYASESEAEDDEQSHVV-LAQTLKSKG 259
            ||::|||||:.:.::|:::...||:.:..::.:.:.|....||||||.|...::. |.|....:|
 Frog   196 YSLKVVPVGMSKGMKKLLQEKFPNMSRWEDISELLVKGANLSESEAEQDGDHNITELPQACAGRG 260

  Fly   260 NLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKTEDEKETLRKLVEKKRKQKEQRK 324
            |::.::|:::|.|||||:|:||:||||||..|:||||..:.|||:|.:.:....|||.::|::||
 Frog   261 NMKAQQSAVRLTEIGPRMTLQLVKIEEGLSDGKVLYHGFIQKTEEEIKAMLDSREKKLQRKKERK 325

  Fly   325 KEQAENRARNLKLKKDEKWAAKRAAEGRT--------------------DSDP-----EDDAEYY 364
            |:|..:..|...||::.|   ||:..|..                    |.||     :||||||
 Frog   326 KKQEGDVERKKNLKEENK---KRSLAGMKRKRGDGEASDSEVEDPGTLGDQDPADQSEDDDAEYY 387

  Fly   365 KEEVGEEPDEELF--------------------------KMEAKSSRKRPSLG-----------G 392
            ::|||||||::||                          |.:.:....||..|           |
 Frog   388 RQEVGEEPDKDLFLHTKKRFSQKPGPPRKKFKGSGKEKPKSDTRGGHNRPHSGKSPIQKRGANVG 452

  Fly   393 GMKYKN----KRAKLDTKDKNDKSERTDKYDRKDKFDRKDKKDKFDPKNRRAKFDPK 445
            |..:|:    |..|...|....:.::..|     ||  ...|..|.||:.:....||
 Frog   453 GKAFKSAHKLKGQKFQGKGTEHRPQQGGK-----KF--PGSKRGFGPKSPKTGHKPK 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppanNP_476979.1 Brix 31..212 CDD:214879 87/180 (48%)
Brix <215..295 CDD:294606 32/80 (40%)
ppanXP_031753615.1 Brix 31..220 CDD:214879 89/188 (47%)
PTZ00449 <393..>547 CDD:185628 14/57 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 240 1.000 Domainoid score I2221
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5690
Inparanoid 1 1.050 329 1.000 Inparanoid score I2413
OMA 1 1.010 - - QHG53510
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004323
OrthoInspector 1 1.000 - - oto103004
Panther 1 1.100 - - LDO PTHR12661
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1766
SonicParanoid 1 1.000 - - X3054
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.100

Return to query results.
Submit another query.