DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and YPT7

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_013713.1 Gene:YPT7 / 855012 SGDID:S000004460 Length:208 Species:Saccharomyces cerevisiae


Alignment Length:180 Identity:64/180 - (35%)
Similarity:110/180 - (61%) Gaps:11/180 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDG-KTIKAQIWDTAGQERYR 74
            :.||:::|||||||::|:.|:..::::.:.|:|||.:|.|:.:.||| |....|:||||||||::
Yeast     8 ILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQ 72

  Fly    75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQN----IVIMLVGNKSDLRHLRSVP 135
            ::..|:||||...:||||:....::||::.|..|...||:.|    ...:::|||.|....:.:.
Yeast    73 SLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEESKKIV 137

  Fly   136 TDEA--KLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRD 183
            ::::  :|......:....|||.::.||:|||:    ||.|...|:...|
Yeast   138 SEKSAQELAKSLGDIPLFLTSAKNAINVDTAFE----EIARSALQQNQAD 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 60/168 (36%)
YPT7NP_013713.1 Rab7 9..182 CDD:206655 63/176 (36%)

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