Protein Alignment Rab11 and YPT52

DIOPT Version :10

• Sequence 1: NP_477170.1
• Gene: Rab11 / 42501
• FlyBaseID: FBgn0015790
• Length: 214
• Species: Drosophila melanogaster
• Sequence 2: NP_012939.1
• Gene: YPT52 / 853884
• SGDID: S000001722
• Length: 234
• Species: Saccharomyces cerevisiae
• Alignment Length: 242
• Identity: 86/242 - (35%)
• Similarity: 127/242 - (52%)
• Gaps: 52/242 - (21%)

  Fly    12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV---DGK-----TIKAQIWDTA 68
            ||:||:|||.||||:::.||.::.|:...:||||..|.::||.:   ||.     .||.:|||||
Yeast     4 FKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNETKDVVIKFEIWDTA 68

  Fly    69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDH-ADQNIVIMLVGNKSDL---- 128
            |||||:::...|||.|..||:||||.:..:.:....|:.||::. .|.::||.|:|||.||
Yeast    69 GQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYLLGNKVDLCQET 133

  Fly   129 ----------------RHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIY---- 173
                            :.:|::.|:|||.:|:..||.|.|.||.....|:..||:|..::|
Yeast   134 PSTETSPDSNEGGDEEQKVRAISTEEAKQYAQEQGLLFREVSAKTGEGVKEIFQDIGEKLYDLKK 198

  Fly   174 -RIVSQ--KQIRDPPEGDV----IRPSNVEPIDVKPTVTADVRKQCC 213
             .|:|:  :||.....|.|    .|||..:|            ..||
Yeast   199 DEILSKQNRQIGGGNNGQVDINLQRPSTNDP------------TSCC 233

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab11	NP_477170.1	Rab11_like	9..173	CDD:206660	73/189 (39%)
YPT52	NP_012939.1	Rab5_related	3..194	CDD:206653	73/189 (39%)