DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and YPT32

DIOPT Version :9

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_011305.1 Gene:YPT32 / 852662 SGDID:S000003178 Length:222 Species:Saccharomyces cerevisiae


Alignment Length:221 Identity:136/221 - (61%)
Similarity:166/221 - (75%) Gaps:10/221 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ARED---EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
            :.||   :||||||:||||||||||||||||||.:|||:|||||||||||||:|||:.|.|||||
Yeast     2 SNEDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQI 66

  Fly    65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 129
            ||||||||||||||||||||||||:||||:|..:|||...||.|||::||.|:.:.|:||||||.
Yeast    67 WDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLA 131

  Fly   130 HLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDVIRPSN 194
            |||:|||||||.||..|.:.|.|||||:|.||:.||:.::..|:::||:.|:.....|.....||
Yeast   132 HLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGSGTNNMGSN 196

  Fly   195 VEP----IDVKPTVTADVRKQ---CC 213
            ..|    |.:.|....|.:|:   ||
Yeast   197 GAPKGPTISLTPAPKEDKKKKSSNCC 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 119/163 (73%)
YPT32NP_011305.1 Rab11_like 11..175 CDD:206660 119/163 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 242 1.000 Domainoid score I370
eggNOG 1 0.900 - - E2759_KOG0087
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 259 1.000 Inparanoid score I630
Isobase 1 0.950 - 0 Normalized mean entropy S128
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000259
OrthoInspector 1 1.000 - - otm46725
orthoMCL 1 0.900 - - OOG6_100582
Panther 1 1.100 - - O PTHR47979
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5006
SonicParanoid 1 1.000 - - X277
TreeFam 1 0.960 - -
1312.800

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