DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and RAB2B

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_116235.2 Gene:RAB2B / 84932 HGNCID:20246 Length:216 Species:Homo sapiens


Alignment Length:214 Identity:102/214 - (47%)
Similarity:130/214 - (60%) Gaps:8/214 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
            |.||||.::|||:|||||.||.:||...|......||||||..|.:.:|||.||.|||||||||.
Human     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 67

  Fly    73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVPTD 137
            :|:||.:|||||.||||||||.:..|:.::..||.:.|.|:..|:||||:||||||...|.|..:
Human    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKRE 132

  Fly   138 EAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK--QIRDPPEGDVIRPSNVEPIDV 200
            |.:.||..:||.|:||||..:.|||.||.|...||||.:.|.  .:.:...|..|.|.......|
Human   133 EGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIKIGPQQSISTSV 197

  Fly   201 KPTV----TADV--RKQCC 213
            .|:.    :.|:  ...||
Human   198 GPSASQRNSRDIGSNSGCC 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 89/163 (55%)
RAB2BNP_116235.2 PLN03108 1..216 CDD:178655 100/212 (47%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P61106 37..42 3/4 (75%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P61106 63..72 5/8 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..216 4/26 (15%)

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