Protein Alignment Rab11 and RABA4B

DIOPT Version :9

• Sequence 1: NP_477170.1
• Gene: Rab11 / 42501
• FlyBaseID: FBgn0015790
• Length: 214
• Species: Drosophila melanogaster
• Sequence 2: NP_195709.1
• Gene: RABA4B / 830160
• AraportID: AT4G39990
• Length: 224
• Species: Arabidopsis thaliana
• Alignment Length: 223
• Identity: 123/223 - (55%)
• Similarity: 164/223 - (73%)
• Gaps: 20/223 - (8%)

  Fly     2 GAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 66
            |....:.||:|||||||||.||||.||:||.|:||:::||:||||||.||::.::.|:|||||||
plant     8 GGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72

  Fly    67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 131
            |||||||||:|||||||||||:||||:.|..|:|::.|||.|||.|||:||||:|:||||||...
plant    73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDLEDQ 137

  Fly   132 RSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGD-------- 188
            |:|||::||.|||:.||.|:|||||::||||.:|..::|:||..|::|.:..  |||
plant   138 RAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLAS--EGDSNNPGSLA 200

  Fly   189 ---VIRPSNVEPIDVKPTVTADVRKQCC 213
               ::.|.:.:.|..|.:.       ||
plant   201 GKKILIPGSGQEIPAKTST-------CC 221

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab11	NP_477170.1	Rab11_like	9..173	CDD:206660	110/163 (67%)
RABA4B	NP_195709.1	PLN03110	15..223	CDD:178657	122/216 (56%)
		Rab11_like	15..179	CDD:206660	110/163 (67%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0087
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1133775at2759
OrthoFinder	1	1.000	-	-		FOG0000259
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	5	4.780