DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and RABH1c

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_195699.1 Gene:RABH1c / 830148 AraportID:AT4G39890 Length:214 Species:Arabidopsis thaliana


Alignment Length:94 Identity:18/94 - (19%)
Similarity:37/94 - (39%) Gaps:14/94 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAGGKAGKDSGKAKAKAVSRSARAGLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEY---- 61
            :|.|.||.:.|...|.|.:.:|.:|     |....:....:....::.....:|...:.:|    
plant   113 LAEGVAGPEKGGGSAAAAAAAAASG-----GAGADNSAEHSDYRAKLSQIRQIYHTELEKYEQAC 172

  Fly    62 --LTAEVLELAGNASKDLKVKRITPRHLQ 88
              .|..|:.|....|   :.:.|:|:.::
plant   173 NEFTTHVMNLLREQS---RTRPISPKEIE 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 14/86 (16%)
RABH1cNP_195699.1 Rab6 10..171 CDD:206654 12/62 (19%)

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