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Protein Alignment Rab11 and RABB1C
DIOPT Version :9
Sequence 1: | NP_477170.1 |
Gene: | Rab11 / 42501 |
FlyBaseID: | FBgn0015790 |
Length: | 214 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_193450.1 |
Gene: | RABB1C / 827428 |
AraportID: | AT4G17170 |
Length: | 211 |
Species: | Arabidopsis thaliana |
Alignment Length: | 176 |
Identity: | 93/176 - (52%) |
Similarity: | 118/176 - (67%) |
Gaps: | 5/176 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
|.||||.::|||:|||||.||.:||...|......||||||..|.|.:|.|.||.|||||||||.
plant 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQES 67
Fly 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVPTD 137
:|:||.:|||||.||||||||.:..|:.::..||.:.|.||:.|:.|||:|||.||.|.|:|.|:
plant 68 FRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTE 132
Fly 138 EAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRD 183
|.:.||:.:||.|:|.||..:.|||.||......|| |:|:|
plant 133 EGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIY-----KKIQD 173
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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