DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and Rab2a

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_113906.2 Gene:Rab2a / 65158 RGDID:68323 Length:212 Species:Rattus norvegicus


Alignment Length:189 Identity:97/189 - (51%)
Similarity:124/189 - (65%) Gaps:2/189 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
            |.||||.::|||:|||||.||.:||...|......||||||..|.|.:|||.||.|||||||||.
  Rat     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67

  Fly    73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVPTD 137
            :|:||.:|||||.||||||||.:..|:.::..||.:.|.|::.|:||||:||||||...|.|..:
  Rat    68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKE 132

  Fly   138 EAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK--QIRDPPEGDVIRPSN 194
            |.:.||..:||.|:||||..::|||.||.|...|||..:.:.  .|.:...|..|.|.:
  Rat   133 EGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQH 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 90/163 (55%)
Rab2aNP_113906.2 PLN03108 1..188 CDD:178655 95/184 (52%)
Required for interaction with PRKCI. /evidence=ECO:0000250 2..19 10/15 (67%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P61106 63..72 5/8 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..212 0/2 (0%)

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