Protein Alignment Rab11 and rab5d

DIOPT Version :10

• Sequence 1: NP_477170.1
• Gene: Rab11 / 42501
• FlyBaseID: FBgn0015790
• Length: 214
• Species: Drosophila melanogaster
• Sequence 2: NP_001025576.1
• Gene: rab5d / 594964
• XenbaseID: XB-GENE-489496
• Length: 213
• Species: Xenopus tropicalis
• Alignment Length: 210
• Identity: 84/210 - (40%)
• Similarity: 124/210 - (59%)
• Gaps: 26/210 - (12%)

  Fly    12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAI 76
            ||:||:||..||||:|:.||.:.:|:...::|||..|..:|:.:|..|:|.:||||||||||.::
 Frog    20 FKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSL 84

  Fly    77 TSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVPTDEAKL 141
            ...|||||..|::|:||.|..|::..:.|::||:..|..||||.|.||||||...|.|..:||:.
 Frog    85 APMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDLAEKRMVEYEEAQA 149

  Fly   142 FAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDVIRPS--------NVEPI 198
            :||..||.|:||||..:.||        .|::..:::|.    |:.|...|:        ||:..
 Frog   150 YAEDTGLLFMETSAKTAMNV--------NELFLAIAKKM----PKSDAQNPTHAARNRGVNVQGS 202

  Fly   199 DVKPTVTADVRKQCC 213
            :.:|      |..||
 Frog   203 EQQP------RSGCC 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab11	NP_477170.1	Rab11_like	9..173	CDD:206660	74/160 (46%)
rab5d	NP_001025576.1	Rab5_related	19..181	CDD:206653	75/172 (44%)