DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and rab19

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:XP_073798761.1 Gene:rab19 / 555645 -ID:- Length:271 Species:Danio rerio


Alignment Length:217 Identity:88/217 - (40%)
Similarity:132/217 - (60%) Gaps:14/217 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 REDE--YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 66
            ||||  .|:|||::|||||.|||:.::..|...|......:||||:|..|||:|||:.:|.|:||
Zfish    60 REDEERCDFLFKIILIGDSNVGKTCVIQSFRSAEVTELQHNTIGVDFTVRSIDVDGRRVKMQVWD 124

  Fly    67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 131
            ||||||:|.||.:|||.|.||::.||:::..|::::..|::.|..:...::|::|:|||.||...
Zfish   125 TAGQERFRTITQSYYRSAHGAMIAYDLSRRDTFDSLPHWIQALEQYGAASLVLVLIGNKCDLEAQ 189

  Fly   132 RSVPTDEAKLFAERNG-LSFIETSALDSTNVETAFQNILTEIY----RIVSQKQIRDPPEGDVIR 191
            |.|..::|...|||:| |:.:||||....|:|.|||.:..|:.    .|..|....|.|  .|..
Zfish   190 RQVLFEDACTLAERSGALAALETSAKHHHNIEEAFQLMARELLVRHGGIHYQDNQSDSP--TVYL 252

  Fly   192 PSNVEPIDVKPTVTADVRKQCC 213
            .|:..||:.:     .:.|:.|
Zfish   253 HSDSHPIEGE-----QLEKRSC 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 74/164 (45%)
rab19XP_073798761.1 None

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