DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and rab11b

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001011048.1 Gene:rab11b / 496458 XenbaseID:XB-GENE-491174 Length:218 Species:Xenopus tropicalis


Alignment Length:218 Identity:184/218 - (84%)
Similarity:193/218 - (88%) Gaps:6/218 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 65
            ||||:||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||
 Frog     1 MGARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65

  Fly    66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 130
            |||||||||||||||||||||||||||||||||||||||||:|||||||.|||||||||||||||
 Frog    66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRH 130

  Fly   131 LRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDVIRPSNV 195
            ||:||||||:.|||:|.|||||||||||||||.||:|||||||||||||||.|....|....:||
 Frog   131 LRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDESPGNNV 195

  Fly   196 EPIDVKPTVTADVRK----QCCQ 214
            ..|.|.|  |.|.:|    ||||
 Frog   196 VDISVPP--TTDGQKSSKLQCCQ 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 153/163 (94%)
rab11bNP_001011048.1 Rab11_like 9..173 CDD:206660 153/163 (94%)

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