DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and si:dkey-13a21.4

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:XP_073771951.1 Gene:si:dkey-13a21.4 / 494576 ZFINID:ZDB-GENE-040724-163 Length:229 Species:Danio rerio


Alignment Length:160 Identity:61/160 - (38%)
Similarity:97/160 - (60%) Gaps:6/160 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK-TIKAQIWDTAGQERYRAI 76
            |::|||:||||||:.::||..:.|....::||||:|.|:.|.||.: .|..|||||||.||:.::
Zfish    10 KLILIGNSGVGKSSFMTRFVDHRFTNLYRATIGVDFLTKEITVDRRPVILQQIWDTAGTERFHSL 74

  Fly    77 TSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQN----IVIMLVGNKSDLRHLRSVPTD 137
            .|:.||||...|||:|:...:::|.::.|.:|....|..:    ...:::|||.||.| |.|.|.
Zfish    75 GSSLYRGAQCCLLVFDVTSSVSFEALDVWKKEFLVQACPSDPAAFPFIVLGNKIDLDH-RQVSTS 138

  Fly   138 EAKLFAERNGLSFIETSALDSTNVETAFQN 167
            :|:.:....|..:.|:||.:...|:..|.:
Zfish   139 KAQKWCVDIGAEYFESSAKEDIGVDKTFHS 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 61/160 (38%)
si:dkey-13a21.4XP_073771951.1 None

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