DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and rab25a

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001008641.2 Gene:rab25a / 494098 ZFINID:ZDB-GENE-041212-69 Length:210 Species:Danio rerio


Alignment Length:174 Identity:128/174 - (73%)
Similarity:157/174 - (90%) Gaps:0/174 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
            |:::|||||||:|||||||||||||:||||.:|::||||||:|||::||..|||||||||||.||
Zfish     7 YNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQIWDTAGLER 71

  Fly    73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVPTD 137
            |||||||||||||||||||||.||||||:|||||:||.||||.:||:||||||:||..:|:|||:
Zfish    72 YRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGNKNDLATVRTVPTE 136

  Fly   138 EAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
            |||.||:.|||.|:|||||:|||||:||..:||.|::.|:.|::
Zfish   137 EAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASKEV 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 124/163 (76%)
rab25aNP_001008641.2 Rab11_like 9..172 CDD:206660 124/162 (77%)

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