DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and rab-11.2

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001251691.1 Gene:rab-11.2 / 4363014 WormBaseID:WBGene00004275 Length:198 Species:Caenorhabditis elegans


Alignment Length:208 Identity:137/208 - (65%)
Similarity:167/208 - (80%) Gaps:14/208 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 70
            :||.||||:||||:.||||||||||||||||||:||.||||||||:.|.|:||.:|.|||||||.
 Worm     3 NEYYYLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGM 67

  Fly    71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVP 135
            ||:|...|:|||||:||||||||:||.|||:||:||:.|||||:::|||.||||||||.|  :||
 Worm    68 ERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLSH--AVP 130

  Fly   136 TDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDVIRPSNVEPIDV 200
            |||||::||||.:|||||||||:||||.||.||:||||::||:| .:| ..|.:| ||       
 Worm   131 TDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKLVSEK-YKD-HSGTII-PS------- 185

  Fly   201 KPTVTADVRKQCC 213
              |.:...:.|||
 Worm   186 --TASNTPKNQCC 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 121/163 (74%)
rab-11.2NP_001251691.1 Rab11_like 7..168 CDD:206660 121/162 (75%)

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