DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and Rab23

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_649574.1 Gene:Rab23 / 40701 FlyBaseID:FBgn0037364 Length:268 Species:Drosophila melanogaster


Alignment Length:203 Identity:69/203 - (33%)
Similarity:119/203 - (58%) Gaps:4/203 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 68
            |||:.:...|||::|:.|||||:::.|:.:..|..:.|.||||:|..|.||:||:.::..:||||
  Fly    30 REDDIELAIKVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEIDGEDVRIMLWDTA 94

  Fly    69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRS 133
            |||.:..||.||||||..::||:......:::.::.|.|::.:..:: |..::|.||.||.....
  Fly    95 GQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKDWKRKVENECNE-IPTVIVQNKIDLIEQAV 158

  Fly   134 VPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDVIRPSNVEPI 198
            |..||.:..|:......|.||..:..||.:.|:.:.|:.:::::|..  |...|:. :.|:..|.
  Fly   159 VTADEVETLAKLLNCRLIRTSVKEDINVASVFRYLATKCHQLMTQSY--DQVAGNQ-QNSSHPPY 220

  Fly   199 DVKPTVTA 206
            ...||::|
  Fly   221 SSTPTISA 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 58/163 (36%)
Rab23NP_649574.1 Rab23_like 50..197 CDD:133306 51/147 (35%)

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