Protein Alignment Rab11 and rab5c

DIOPT Version :10

• Sequence 1: NP_477170.1
• Gene: Rab11 / 42501
• FlyBaseID: FBgn0015790
• Length: 214
• Species: Drosophila melanogaster
• Sequence 2: NP_958909.1
• Gene: rab5c / 386807
• ZFINID: ZDB-GENE-031118-30
• Length: 221
• Species: Danio rerio
• Alignment Length: 203
• Identity: 82/203 - (40%)
• Similarity: 123/203 - (60%)
• Gaps: 9/203 - (4%)

  Fly    12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAI 76
            ||:||:|:|.||||:|:.||.:.:|:...:||||..|.|:::.:|..|:|.:||||||||||.::
Zfish    23 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSL 87

  Fly    77 TSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVPTDEAKL 141
            ...|||||..|::||||....|:...:.|::||:..|..||||.|.|||:||.:.|:|...||:.
Zfish    88 APMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADLANKRAVDFQEAQA 152

  Fly   142 FAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDVIRPSNVE-PIDVKPTVT 205
            :|:.|.|.|:||||..:.||        .||:..:::|..:..|:|......... .:|::.|..
Zfish   153 YADDNSLLFMETSAKTAMNV--------NEIFMAIAKKLPKSEPQGGAGSGGRARGGVDLQETAP 209

  Fly   206 ADVRKQCC 213
            .....|||
Zfish   210 QGRSGQCC 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab11	NP_477170.1	Rab11_like	9..173	CDD:206660	73/160 (46%)
rab5c	NP_958909.1	Rab5_related	22..184	CDD:206653	75/168 (45%)