Protein Alignment Rab11 and Rabl2

DIOPT Version :9

• Sequence 1: NP_477170.1
• Gene: Rab11 / 42501
• FlyBaseID: FBgn0015790
• Length: 214
• Species: Drosophila melanogaster
• Sequence 2: XP_006242287.1
• Gene: Rabl2 / 362987
• RGDID: 1306749
• Length: 250
• Species: Rattus norvegicus
• Alignment Length: 215
• Identity: 67/215 - (31%)
• Similarity: 110/215 - (51%)
• Gaps: 32/215 - (14%)

  Fly     5 EDEYD--YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 67
            :::||  ...|::.:|||.||||.|:.||..:.|..:..||..:.....:..||||||....|||
  Rat    40 QEKYDAHENVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDT 104

  Fly    68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK--SDLRH 130
            |||||::::.::||..|...::|:|:.:.:||:|:..|..|||:...: |..:||.||  :|::
  Rat   105 AGQERFQSMHASYYHKAHACIMVFDVQRKITYKNLGTWYAELREFRPE-IPCILVANKIDADIQ- 167

  Fly   131 LRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQN------------------ILTEIYRIVS 177
                .|.:...||::..|.....||.|.|||...|.:                  :|.|:.....
  Rat   168 ----MTQKNFSFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVAYKKSSQDFMDEVLQELENFKL 228

  Fly   178 QKQIRDPP---EGDVIR-PS 193
            :::..|.|   :||:.: ||
  Rat   229 EQKEEDTPDQEQGDMSKSPS 248

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab11	NP_477170.1	Rab11_like	9..173	CDD:206660	60/185 (32%)
Rabl2	XP_006242287.1	RabL2	49..209	CDD:133324	57/165 (35%)
		RAB	49..198	CDD:197555	56/154 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0087
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810