DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and Rab2

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster


Alignment Length:171 Identity:93/171 - (54%)
Similarity:117/171 - (68%) Gaps:0/171 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
            |.||||.::|||:|||||.||.:||...|......||||||..|.|.:|||.||.|||||||||.
  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67

  Fly    73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVPTD 137
            :|:||.:|||||.||||||||.:..|:.::..||.:.|.|::.|:||||:||||||...|.|..:
  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKE 132

  Fly   138 EAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ 178
            |.:.||..:||.|:||||..:.|||.||.|...|||..:.:
  Fly   133 EGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQE 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 90/163 (55%)
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 93/171 (54%)

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