DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and RAB7B

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_796377.3 Gene:RAB7B / 338382 HGNCID:30513 Length:199 Species:Homo sapiens


Alignment Length:204 Identity:60/204 - (29%)
Similarity:111/204 - (54%) Gaps:17/204 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAIT 77
            |::::|..||||::||.::....|..|.::|:|....::.|.:...|:|.|||||.||||:|::.
Human    10 KLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQIWDTGGQERFRSMV 74

  Fly    78 SAYYRGAVGALLVYDIAKHLTYENVERWLRELRDH---ADQNIVIMLVGNKSDLRHLRSVPTDEA 139
            |.:|:|:.|.:|.:|:....::|.::.|..::...   .:|:..::|:|||.||.. |.||.:.|
Human    75 STFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSYPMVLLGNKIDLAD-RKVPQEVA 138

  Fly   140 KLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDVIRPSNVEPIDVKPTV 204
            :.:.....:.:.|.||.:..||..||:.:.:   |.:|:.|       .::.....|.|.:.|..
Human   139 QGWCREKDIPYFEVSAKNDINVVQAFEMLAS---RALSRYQ-------SILENHLTESIKLSPDQ 193

  Fly   205 TADVRKQCC 213
            :   |.:||
Human   194 S---RSRCC 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 51/162 (31%)
RAB7BNP_796377.3 Rab 9..169 CDD:206640 51/159 (32%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P51149 28..41 2/12 (17%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P51149 67..82 7/14 (50%)

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