Protein Alignment Rab11 and Rab39a

DIOPT Version :10

• Sequence 1: NP_477170.1
• Gene: Rab11 / 42501
• FlyBaseID: FBgn0015790
• Length: 214
• Species: Drosophila melanogaster
• Sequence 2: NP_001101618.1
• Gene: Rab39a / 315668
• RGDID: 1311286
• Length: 217
• Species: Rattus norvegicus
• Alignment Length: 215
• Identity: 94/215 - (43%)
• Similarity: 135/215 - (62%)
• Gaps: 18/215 - (8%)

  Fly    10 YLFKVVLIGDSGVGKSNLLSRFTRNEF-NLESKS---TIGVEFATRSIEVD-GKTIKAQIWDTAG 69
            |.|::::||||.||||.||.|||:..| .|.|.:   |:||:|.:|.:|:: ||.||.|:|||||
  Rat     7 YQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGKRIKLQLWDTAG 71

  Fly    70 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQ-NIVIMLVGNKSDLRHLRS 133
            |||:|:||.:|||.:||..||:||....::|:|:.||.|.:.|... .||.:|||:|.||...|.
  Rat    72 QERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMHVQPFQIVFLLVGHKCDLASQRQ 136

  Fly   134 VPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQ--IRDPPEG--DVIRPSN 194
            |..:||:..::..|:.:|||||.|:||||.:|..:..:||.::.:..  |:|..||  ....|:.
  Rat   137 VSREEAEKLSKDCGMKYIETSAKDATNVEESFTILARDIYELIKKGDICIQDGWEGVKSGFVPNT 201

  Fly   195 VEPID--VKPTVTADVRKQC 212
            |...:  |||      ||||
  Rat   202 VHSSEEAVKP------RKQC 215

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab11	NP_477170.1	Rab11_like	9..173	CDD:206660	79/168 (47%)
Rab39a	NP_001101618.1	Rab39	7..217	CDD:133311	94/215 (44%)