Protein Alignment Rab11 and ypt4

DIOPT Version :9

• Sequence 1: NP_477170.1
• Gene: Rab11 / 42501
• FlyBaseID: FBgn0015790
• Length: 214
• Species: Drosophila melanogaster
• Sequence 2: NP_594796.1
• Gene: ypt4 / 2542113
• PomBaseID: SPAC1B3.11c
• Length: 234
• Species: Schizosaccharomyces pombe
• Alignment Length: 240
• Identity: 90/240 - (37%)
• Similarity: 135/240 - (56%)
• Gaps: 39/240 - (16%)

  Fly     5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV----DGKTIKAQIW 65
            ::.||||.|:||.|.||.|||.||.||.:|:::.:...|:|::||:|.|.|    ..|.||.|||
pombe     3 KESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIW 67

  Fly    66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 130
            ||||||::|::...|||||.||:||||:....::|.:..||.::|..|...|.::|.|:||||::
pombe    68 DTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDLQN 132

  Fly   131 LRSVPTDEAKLF-AERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPE-------G 187
            .|.|.|:||..| :|::..|..|||:...:|||..|.::::.|...:...:| ||.:       |
pombe   133 QRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTIITRIELGEI-DPQDQSLGIQYG 196

  Fly   188 DVI--RPSNVEPIDVKPTVTAD-----------------VRKQCC 213
            |:.  ||       |.|:.|::                 .|..||
pombe   197 DLSFRRP-------VHPSSTSNWWTSITNWDDLVRLERQTRSYCC 234

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab11	NP_477170.1	Rab11_like	9..173	CDD:206660	75/168 (45%)
ypt4	NP_594796.1	RAB	10..178	CDD:197555	73/167 (44%)
		Rab	10..173	CDD:206640	72/162 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910