DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and RAB21

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_055814.1 Gene:RAB21 / 23011 HGNCID:18263 Length:225 Species:Homo sapiens


Alignment Length:198 Identity:72/198 - (36%)
Similarity:113/198 - (57%) Gaps:8/198 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYR 74
            |.|||||:|:..|||::|:.|:..|:||.:..:|:...|.|:.:.:.||.:...|||||||||:.
Human    18 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFH 82

  Fly    75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVPTDEA 139
            |:...|||.:.||:|||||....:::.|:.|::|||......|.:.:||||.||...|.|...||
Human    83 ALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEA 147

  Fly   140 KLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGD-VIRPS----NVEPID 199
            :.:||..|.....|||..:..:|..|.::..   |::...|:.:..:|: ..:|.    .|:.||
Human   148 ESYAESVGAKHYHTSAKQNKGIEELFLDLCK---RMIETAQVDERAKGNGSSQPGTARRGVQIID 209

  Fly   200 VKP 202
            .:|
Human   210 DEP 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 64/162 (40%)
RAB21NP_055814.1 Rab21 20..181 CDD:133323 64/163 (39%)

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