DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and Rab7b

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:XP_006529491.1 Gene:Rab7b / 226421 MGIID:2442295 Length:257 Species:Mus musculus


Alignment Length:211 Identity:56/211 - (26%)
Similarity:108/211 - (51%) Gaps:31/211 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAIT 77
            |::::|..||||::||.::....|..|.::|:|....::.|.:|..|:|.|||||.||||:|::.
Mouse    68 KLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQIWDTGGQERFRSMV 132

  Fly    78 SAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHA-------DQNIVIMLVGNKSDLRHLRSVP 135
            |.:|:|:.|.:|.:|:....::|.::.|    ||..       :|:..::::|||.||.. |.|.
Mouse   133 STFYKGSDGCILAFDVTDPESFEALDIW----RDDVLAKIIPMEQSYPMVVLGNKIDLED-RKVS 192

  Fly   136 TDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEI---YRIVSQKQIRDPPEGDVIRPSNVEP 197
            .:....:.:...:.:.|.||.:..||..||:.:.:..   |:..::..:             ::.
Mouse   193 QEVVHGWCKEKDMPYFEVSAKNDINVVQAFEVLASRALLRYQGTAENHL-------------IDS 244

  Fly   198 IDVKPTVTADVRKQCC 213
            |.:.|   ...:.:||
Mouse   245 IKLSP---GQPKSRCC 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 51/169 (30%)
Rab7bXP_006529491.1 Rab 67..227 CDD:206640 51/163 (31%)

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