DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and Rab23

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_033025.2 Gene:Rab23 / 19335 MGIID:99833 Length:237 Species:Mus musculus


Alignment Length:186 Identity:65/186 - (34%)
Similarity:103/186 - (55%) Gaps:10/186 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAG 69
            |::.:...|:|::|:..||||:::.|:.:..|..:.|.||||:|..|.|:|:.:.::..:|||||
Mouse     3 EEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAG 67

  Fly    70 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERW----LRELRDHADQNIVIMLVGNKSDLRH 130
            ||.:.|||.||||||...:||:......::|.:..|    :.|:.|     |...||.||.||..
Mouse    68 QEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGD-----IPTALVQNKIDLLD 127

  Fly   131 LRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPE 186
            ...:..:||:..|:|..|.|..||..:..||...|: .|.|.:....::||.:.||
Mouse   128 DSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFK-YLAEKHLQKLKQQITEDPE 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 60/167 (36%)
Rab23NP_033025.2 Rab23_like 10..169 CDD:133306 60/164 (37%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P20340 28..46 7/17 (41%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P20340 65..84 14/18 (78%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..237
Blue background indicates that the domain is not in the aligned region.

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