DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and Rab19

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_035356.1 Gene:Rab19 / 19331 MGIID:103292 Length:217 Species:Mus musculus


Alignment Length:169 Identity:77/169 - (45%)
Similarity:116/169 - (68%) Gaps:1/169 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAG 69
            ::..||||||:|||||.|||:.::..|....::...::||||:|..||:|:|||.:|.|:|||||
Mouse    11 DENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAG 75

  Fly    70 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSV 134
            |||:|.||.:|||.|..|::.||:.:..|:|:|..|:.|:..:...|:||||:||||||...|.|
Mouse    76 QERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHV 140

  Fly   135 PTDEAKLFAERNG-LSFIETSALDSTNVETAFQNILTEI 172
            ..::|...||::| |:.:||||.:|.|::..|..:..|:
Mouse   141 LFEDACTLAEKHGLLAVLETSAKESRNIDEVFVLMAKEL 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 77/165 (47%)
Rab19NP_035356.1 Rab19 15..179 CDD:133267 76/163 (47%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 39..54 4/14 (29%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 74..89 10/14 (71%)

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