Protein Alignment Rab11 and rab-1

DIOPT Version :10

• Sequence 1: NP_477170.1
• Gene: Rab11 / 42501
• FlyBaseID: FBgn0015790
• Length: 214
• Species: Drosophila melanogaster
• Sequence 2: NP_503397.1
• Gene: rab-1 / 178620
• WormBaseID: WBGene00004266
• Length: 205
• Species: Caenorhabditis elegans
• Alignment Length: 202
• Identity: 101/202 - (50%)
• Similarity: 132/202 - (65%)
• Gaps: 15/202 - (7%)

  Fly     1 MGAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 65
            |.|...|||||||::||||||||||.||.||..:.:.....|||||:|..|:||:||||||.|||
 Worm     1 MAAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIW 65

  Fly    66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 130
            |||||||:|.|||:|||||.|.::||||....|:.||::||:|:..:|.:|:..:|||||.||..
 Worm    66 DTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDLTA 130

  Fly   131 LRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEI---------------YRIVSQKQ 180
            .|:|.|..|:.:|.:.|:.|:||||..|||||.||..:.:||               .||...:.
 Worm   131 KRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQGAGGAPGVRITGSQP 195

  Fly   181 IRDPPEG 187
            ::|...|
 Worm   196 VQDKKSG 202

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab11	NP_477170.1	Rab11_like	9..173	CDD:206660	93/178 (52%)
rab-1	NP_503397.1	Rab1_Ypt1	10..175	CDD:206661	92/164 (56%)