Protein Alignment Rab11 and Rab3d

DIOPT Version :10

• Sequence 1: NP_477170.1
• Gene: Rab11 / 42501
• FlyBaseID: FBgn0015790
• Length: 214
• Species: Drosophila melanogaster
• Sequence 2: XP_006242655.1
• Gene: Rab3d / 140665
• RGDID: 620924
• Length: 239
• Species: Rattus norvegicus
• Alignment Length: 167
• Identity: 70/167 - (41%)
• Similarity: 108/167 - (64%)
• Gaps: 0/167 - (0%)

  Fly     3 AREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 67
            |.:..:||:||::|||:|.|||::.|.|:..:.|.....||:|::|..:::....|.||.|||||
  Rat    34 AADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDT 98

  Fly    68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 132
            |||||||.||:||||||:|.||:||||...::..|:.|..:::.::..|..::|||||.||...|
  Rat    99 AGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDER 163

  Fly   133 SVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNIL 169
            .|..::.:..|...|..|.|.||.::.||:..|:.::
  Rat   164 VVSAEDGQRLAGDLGFEFFEASAKENINVKQVFERLV 200

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab11	NP_477170.1	Rab11_like	9..173	CDD:206660	69/161 (43%)
Rab3d	XP_006242655.1	Rab3	42..206	CDD:206657	67/159 (42%)