DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and rab2a

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_958862.1 Gene:rab2a / 140617 ZFINID:ZDB-GENE-011212-2 Length:212 Species:Danio rerio


Alignment Length:189 Identity:97/189 - (51%)
Similarity:124/189 - (65%) Gaps:2/189 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
            |.||||.::|||:|||||.||.:||...|......||||||..|.|.:|||.||.|||||||||.
Zfish     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67

  Fly    73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVPTD 137
            :|:||.:|||||.||||||||.:..|:.::..||.:.|.|::.|:||||:||||||...|.|..:
Zfish    68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKE 132

  Fly   138 EAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK--QIRDPPEGDVIRPSN 194
            |.:.||..:||.|:||||..::|||.||.|...|||..:.:.  .|.:...|..|.|.:
Zfish   133 EGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQH 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 90/163 (55%)
rab2aNP_958862.1 PLN03108 1..188 CDD:178655 95/184 (52%)

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