DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and Rab8

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:XP_321946.4 Gene:Rab8 / 1281958 VectorBaseID:AGAMI1_007866 Length:208 Species:Anopheles gambiae


Alignment Length:191 Identity:89/191 - (46%)
Similarity:129/191 - (67%) Gaps:1/191 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
            ||||||::|||||||||:.:|.||:.:.||....||||::|..|:|::|||.||.||||||||||
Mosquito     5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIDLDGKKIKLQIWDTAGQER 69

  Fly    73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVPTD 137
            :|.||:||||||:|.:|||||.:..::||::.|:|.:.::|..::..||:|||.:|...|.|...
Mosquito    70 FRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENAAADVEKMLLGNKCELNEKRQVTRV 134

  Fly   138 EAKLFAERNGLSFIETSALDSTNVETAFQNILTEI-YRIVSQKQIRDPPEGDVIRPSNVEP 197
            ..:..|...|:.|:||||..|.||:.||..:..:| .::..:.:..:||:|.......|||
Mosquito   135 RGEQLAVEYGIKFMETSAKASINVDDAFFTLARDIKCKMEKRMEANNPPKGGHQLKPQVEP 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 82/164 (50%)
Rab8XP_321946.4 Rab8_Rab10_Rab13_like 6..172 CDD:206659 82/165 (50%)

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