DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and Rab30

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:XP_061496808.1 Gene:Rab30 / 1281369 VectorBaseID:AGAMI1_004366 Length:237 Species:Anopheles gambiae


Alignment Length:196 Identity:84/196 - (42%)
Similarity:126/196 - (64%) Gaps:18/196 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 70
            ::|.:||||||:|::||||:.|:.|||:..|.....:||||:|..:::|||.:.||.||||||||
Mosquito     2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDNQKIKLQIWDTAGQ 66

  Fly    71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVP 135
            ||:|:||.:|||.|...:|||||:...|::.:..||||:::||:..::.:|||||:| |..|.:|
Mosquito    67 ERFRSITQSYYRSASALILVYDISCQPTFDCLPDWLREIQEHANSKVLKILVGNKTD-RDDREIP 130

  Fly   136 TDEAKLFAERNGLSFIETSALDSTNVETAFQNIL-----------------TEIYRIVSQKQIRD 183
            .:....||:::|:.|:||||..:.|||..|.:|.                 |.:...:|||.|..
Mosquito   131 QEVGAEFAKQHGMYFLETSAKQADNVERLFYDIAAVLIEQARTKEFTLRSETSVLTNLSQKTIYH 195

  Fly   184 P 184
            |
Mosquito   196 P 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 78/180 (43%)
Rab30XP_061496808.1 None

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