DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and RABL2B

DIOPT Version :9

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001336937.1 Gene:RABL2B / 11158 HGNCID:9800 Length:239 Species:Homo sapiens


Alignment Length:177 Identity:61/177 - (34%)
Similarity:94/177 - (53%) Gaps:15/177 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAIT 77
            |::.:|||.||||.|:.||..:.|..:..||..:.....:..|||:||....||||||||::::.
Human    23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQERFQSMH 87

  Fly    78 SAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK--SDLRHLRSVPTDEAK 140
            ::||..|...::|:|:.:.:||.|:..|..|||:...: |..::|.||  :|:.     .|.::.
Human    88 ASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREFRPE-IPCIVVANKIDADIN-----VTQKSF 146

  Fly   141 LFAERNGLSFIETSALDSTNV-------ETAFQNILTEIYRIVSQKQ 180
            .||::..|.....||.|.|||       |.|.:.....|...||.||
Human   147 NFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKLFNDAIRLAVSYKQ 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 56/168 (33%)
RABL2BNP_001336937.1 RabL2 22..192 CDD:133324 59/174 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0087
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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