DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and RAB31

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_006859.2 Gene:RAB31 / 11031 HGNCID:9771 Length:195 Species:Homo sapiens


Alignment Length:213 Identity:82/213 - (38%)
Similarity:124/213 - (58%) Gaps:19/213 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 65
            |..||      .||.|:||:|||||:::.||.::.|:.....|||..|.|:::....:..|..||
Human     2 MAIRE------LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIW 60

  Fly    66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 130
            |||||||:.::...||||:..|::||||.|..::..:::|::||::|..:|||:.:.|||.||..
Human    61 DTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSD 125

  Fly   131 LRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDVIRPSNV 195
            :|.||..:||.:||..|...:||||.::.|:|..||.|..:|..:       ||.|........|
Human   126 IREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPL-------DPHENGNNGTIKV 183

  Fly   196 EPIDVKPTVTADVRKQCC 213
            |    |||:.|.  ::||
Human   184 E----KPTMQAS--RRCC 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 67/163 (41%)
RAB31NP_006859.2 Rab5_related 6..168 CDD:206653 68/167 (41%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P20339 30..42 4/11 (36%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P20339 63..79 8/15 (53%)

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