DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab11 and rab32b

DIOPT Version :10

Sequence 1:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster
Sequence 2:XP_021328755.2 Gene:rab32b / 100000199 ZFINID:ZDB-GENE-090821-4 Length:211 Species:Danio rerio


Alignment Length:217 Identity:71/217 - (32%)
Similarity:119/217 - (54%) Gaps:31/217 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIWDTAGQER 72
            ::||||::|||..||||:.:.|:.||:|..|.|::|||:|:.:.|:.|..| ::.|:||.|||||
Zfish    14 EHLFKVLVIGDHKVGKSSFVKRYVRNQFYEELKTSIGVDFSMKVIDWDAHTRVRLQLWDIAGQER 78

  Fly    73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI--------MLVGNKSDLR 129
            .|.:...|:||:.||.:|||:....:.:....|.|||    |..:::        :|:.||.|..
Zfish    79 VRGLNRVYFRGSSGAFVVYDLTNGSSLDGALNWKREL----DCQVMLKNGHPIPAVLLANKCDET 139

  Fly   130 HL--RSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDVIRP 192
            .:  |:....| ||..|:......:|||.::.||:.|.:.::..|.:| :::.:::         
Zfish   140 KVSRRNASLLE-KLCQEKGFTGCFQTSAKENINVDEAAKFLVKHILQI-NEESMKE--------- 193

  Fly   193 SNVEPIDVKP-TVTADVRKQCC 213
             ..:.|.:|| |.|..|   ||
Zfish   194 -EEQKIHLKPQTNTNSV---CC 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 61/174 (35%)
rab32bXP_021328755.2 None

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