DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rtet and SIT1

DIOPT Version :10

Sequence 1:NP_524429.1 Gene:rtet / 42500 FlyBaseID:FBgn0028468 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_010849.3 Gene:SIT1 / 856644 SGDID:S000000791 Length:628 Species:Saccharomyces cerevisiae


Alignment Length:240 Identity:61/240 - (25%)
Similarity:89/240 - (37%) Gaps:79/240 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 IFVSLLFDLLAFTIILPLLPSLLEHYRQNDSSGLYAVLTDRVRWFQQLLGAPDRYISVLFGGFLG 117
            ||.:|   |:||.|       ....|.|.|.  :|.||...|            :.|:.....:.
Yeast   355 IFFAL---LIAFFI-------NFNWYMQGDY--MYTVLVVAV------------HESIKSATRIT 395

  Fly   118 SMFSFLQFVASPIVGGLSDYYGR-KPVLLACASGIALSYLIWACSSNFALFVLARFVGGISKGNI 181
            |::||:..:...|:|.:.....| ||.::   .||:    .|..|  |.|.|..|...|...|.|
Yeast   396 SLYSFVSVIVGTILGFILIKVRRTKPFII---FGIS----CWIVS--FGLLVHYRGDSGAHSGII 451

  Fly   182 -SLCM--------SVITDVS---SVKTRGRGMALVGVAFSLGFIVGPMIGALFAIFSDKSGSTWF 234
             |||:        :.:|..|   |.||..| ||:|...:...:.:|...|      |..||:.| 
Yeast   452 GSLCLLGFGAGSFTYVTQASIQASAKTHAR-MAVVTSLYLATYNIGSAFG------SSVSGAVW- 508

  Fly   235 VLPSLLAFGLAVGDLVVLACCLRETLPKE--KRVKEIS-SALSYG 276
                                  ...||||  ||:.:.: :|.:||
Yeast   509 ----------------------TNILPKEISKRISDPTLAAQAYG 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rtetNP_524429.1 MFS_MFSD10 50..476 CDD:340947 61/240 (25%)
SIT1NP_010849.3 MFS_ARN_like 70..582 CDD:340880 61/240 (25%)

Return to query results.
Submit another query.