DRSC/TRiP Functional Genomics Resources

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Protein Alignment rtet and VAChT

DIOPT Version :10

Sequence 1:NP_524429.1 Gene:rtet / 42500 FlyBaseID:FBgn0028468 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_477138.1 Gene:VAChT / 42795 FlyBaseID:FBgn0270928 Length:578 Species:Drosophila melanogaster


Alignment Length:467 Identity:92/467 - (19%)
Similarity:174/467 - (37%) Gaps:134/467 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 MIYIIFVSLLFDLLAFTIILPLLPSLLEHYRQNDSSGLYAVLTDRVRWFQQLLGAPDRYISVLFG 113
            ::.|:.::||.|.:.:.:|:|::|..|......|.......|.|.:         ..:.|.|...
  Fly    34 ILVIVSIALLLDNMLYMVIVPIIPDYLREIGSFDDGPTPPPLRDNI---------TGKIIPVHHD 89

  Fly   114 --------GFLGSMFSFLQFVASPIVGGLSDYYGRK-PVLLACASGIALSYL---IWACSSNFAL 166
                    |.|.:..:.:|.:.:|..|||.|..|.. |:::    |:.:.:.   ::||.|::::
  Fly    90 HHGQDSATGILFASKAIVQLMVNPFSGGLIDKIGYDLPMMI----GLTIMFFSTAVFACGSSYSV 150

  Fly   167 FVLARFVGGISKGNISLC-MSVITD---VSSVKTRGRGMALVGVAFSLGFIVGPMIGALFAIFSD 227
            ...||.:.|......... :::|.|   ..:.:::..|:||..::|  |.:|.|..|.....|:.
  Fly   151 LFFARSLQGAGSAFADTAGLAMIADRFTEENERSQALGIALAFISF--GCLVAPPFGGALYQFAG 213

  Fly   228 KSGSTWFVLPSLLAFGLAVGDLVVLACCLRETLPKEKRVKEISSALSYGLQLLNFSAIFRFAAIK 292
            |.                |..|::...||.:.|.....:|.:..|:...               |
  Fly   214 KE----------------VPFLILALVCLLDGLMLLLVMKPVKEAMKQS---------------K 247

  Fly   293 NVPKKDIAALRSIGLVYFLYLFLYSG-----------LEFTVTFLMYHKFGYTSMDQAKMFL--- 343
            :|..:.|...|   |:...|:.:.:|           ||.|::..|.......:.....::|   
  Fly   248 DVQDQVIPIWR---LLMDPYIAVCAGALTMSNVALAFLEPTISLWMEDNMTTDNWKIGMVWLPAF 309

  Fly   344 ---TTGVIMTLLQGSVVRRLPEAK---------IKGYAIFSLYLIVPAFVVVGLAEGSRMLYAGM 396
               ..||::|:   .:.|:.|:.:         ::|::.|    |:|      ...|.:||...:
  Fly   310 FPHVLGVVITV---KMARKYPQHQWLMAAGGLALEGFSCF----IIP------FCSGYKMLMLPI 361

  Fly   397 TLFAISTAFAVTC-LTTL--------VSKYGNDDQKGSVLGIFRSLGALARALGPVVGCIAFWCV 452
            .:.....|...|. |.||        ||.|      ||:..|.....::|.|:||:         
  Fly   362 CVICFGIALIDTALLPTLGYLVDVRYVSVY------GSIYAIADISYSIAYAVGPI--------- 411

  Fly   453 GSRITYIAGGLL 464
                  ||||::
  Fly   412 ------IAGGVV 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rtetNP_524429.1 MFS_MFSD10 50..476 CDD:340947 92/466 (20%)
VAChTNP_477138.1 MFS_SLC18A3_VAChT 35..444 CDD:340941 92/466 (20%)

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