DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rtet and CG11537

DIOPT Version :10

Sequence 1:NP_524429.1 Gene:rtet / 42500 FlyBaseID:FBgn0028468 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001097489.1 Gene:CG11537 / 38373 FlyBaseID:FBgn0035400 Length:705 Species:Drosophila melanogaster


Alignment Length:492 Identity:94/492 - (19%)
Similarity:185/492 - (37%) Gaps:97/492 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RHNGTAAMEKQSHSQTGSHHHNNNKALDKEASENGKPE-----------KS----DPMIYIIFVS 56
            |...:||......||.|     |::|..:....|...|           ||    :|.::...|.
  Fly   200 RRTHSAASYISMRSQGG-----NSEATPERPKRNRFFEWIRVVCNICCCKSSGIGEPSVHHALVV 259

  Fly    57 LLFDLLAFTII-LPLLPSLLEHYRQNDSSGLYAVLTDRVRWFQQLLGAPDRYISVLFGGFLGSMF 120
            :..:..|:.:: :|::.:|.:.:                         ||.  :.|..|.:..:.
  Fly   260 IFLEFFAWGLLTMPIISTLNQTF-------------------------PDH--TFLMNGLVMGIK 297

  Fly   121 SFLQFVASPIVGGLSDYYGRKPVLLACASGIALSYLIWAC------SSNFALFVLARFVGGISKG 179
            ..|.|:::|::|.|||.:|||..||..        :.:.|      |.|...|.....:.|....
  Fly   298 GILSFLSAPLIGALSDIWGRKFFLLVT--------VFFTCLPIPLMSINTWWFFAMISISGAFAV 354

  Fly   180 NISLCMSVITDVSSVKTRGRGMALVGVAFSLGFIVGPMIG-ALFAIFSDKSGSTWFVLPSLLAFG 243
            ..|:..:.:.||::.:.|.:...|....|:...::.|.:| ||..::.|       .|...|:..
  Fly   355 TFSVVFAYVADVTTPEERSKAYGLASATFAASLVISPALGNALMEMYGD-------TLVVALSTA 412

  Fly   244 LAVGDLVVLACCLRETLPKEKRVKEISSALSYGLQLLNFSAIFRFAAIKNVPKKDIAALRSIGLV 308
            :|:.|:..:...:.|:|.::.|.....:.:|:. |...|.|:.:....|.|....:..|.|    
  Fly   413 IALLDVFFILVAVPESLSEKMRPASWGAPISWE-QADPFLALRKVGTDKTVLMLCLTVLLS---- 472

  Fly   309 YFLYLFLYSGLEFTVTFL-MYHKFGYTSMDQAKMFLTTGVIMTLLQGSVVRRLPEAKIKGYAIFS 372
                 :|....|::..|: :..|.|:..::.:......|::...:|.::...:.....|...|..
  Fly   473 -----YLPEAGEYSCMFVYLKLKMGFNYVEVSVFIAIVGILSITVQVTLGSFMQVFGAKRTIIMG 532

  Fly   373 LYLIVPAFVVVGLAEGSRMLYAGMTLFAISTAFAVTCLTTLVSKYGNDDQKGSVLGIFRSLGALA 437
            |.|.:...:..|......|:::...:.|:. :.....::..||.|...:.:|:|.|:...:..|.
  Fly   533 LALEIVQLLWYGFGSQKWMMWSAGVVAALG-SITYPAISAFVSLYAAPESQGAVQGMITGMRGLC 596

  Fly   438 RALGPVVGCIAFWCV---------------GSRITYI 459
            ..|||.|..:.|:..               |||.|.:
  Fly   597 NGLGPAVFGVVFYLFNVDLNDDHDSHAKSSGSRATNV 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rtetNP_524429.1 MFS_MFSD10 50..476 CDD:340947 81/434 (19%)
CG11537NP_001097489.1 MFS_MFSD14 253..663 CDD:340945 81/434 (19%)

Return to query results.
Submit another query.